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The GDP does not use any special handling for kernel configurations in comparison to yocto, documentation at http://www.yoctoproject.org/docs/latest/kernel-dev/kernel-dev.html. It does however add some kernel configuration snippets to deal with common use cases and adding support for certain hardware. 

The kernel configurations are added inside genivi-dev-platform/meta-genivi-dev/meta-genivi-dev/recipes-kernel/linux/linux-yocto and will be appended to the configuration using the SRC_URI mechanism available in yocto. There is also BSP specific changes done on different locations in the yocto BSP layers. 

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